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Intron Name: Anas_platyrhynchos_platyrhynchos_22_5312282_5315374_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5312282 - 5315374

Intron Length:

3093

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGCTCTAG

5'SS Class:

weak_major

3'SS Sequence:

GTATGTCTTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAA

U12 Branch Point Sequence:

TACTTATAAATC

Flanking Amino Acid:

SLCLSTRASQSLGCGVPAYA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.6

0.06

1.1

47.9

38.9

Major BPS

78.6

0.71

78.6

Major PPT

71.7

0.49

0.9

62.7

Minor 5ss

39.2

-1.2

3.2

50.2

46.6

Minor BPS

48.5

-0.1

1.9

59.79

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010750

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027013

5308353 - 5315414

7062