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Intron Name: Anas_platyrhynchos_platyrhynchos_22_5332894_5333376_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5332894 - 5333376

Intron Length:

483

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAAGC

5'SS Class:

strong_major

3'SS Sequence:

CTTATTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TTGTCCTTATTC

Flanking Amino Acid:

RDGKRFLGSGGFIGYAPNLK

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.9

0.96

0.8

35.3

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

83.2

0.75

0.8

77.5

31.2

Minor 5ss

33.8

-1.8

2.9

43.7

43.6

Minor BPS

71.6

0.66

1.6

78.05

38.3

Associated Gene:

Gene:

PLOD1

Ensembl Gene ID:

ENSAPLG00000011324

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011890

5326264 - 5342283

16020