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Intron Name: Anas_platyrhynchos_platyrhynchos_22_5333490_5335038_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5333490 - 5335038

Intron Length:

1549

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTACGTGTA

5'SS Class:

major

3'SS Sequence:

CATTCTTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

ATTCTTTTAAAG

Flanking Amino Acid:

TNVFLDPEKRENINISLDHR

Intron Amino Acid Position:

197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.9

0.42

1.1

66.3

39.8

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

74.1

0.54

74.4

33.9

Minor 5ss

36.5

-1.5

3.5

44.8

44.3

Minor BPS

60.6

0.19

1.4

64.12

37.5

Associated Gene:

Gene:

PLOD1

Ensembl Gene ID:

ENSAPLG00000011324

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011890

5326264 - 5342283

16020