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Intron Name: Anas_platyrhynchos_platyrhynchos_22_5337067_5337837_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5337067 - 5337837

Intron Length:

771

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGGCTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTGATGTGACT

Flanking Amino Acid:

MENAEARNLGMDLCRKDPDC

Intron Amino Acid Position:

369

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

79.7

28.2

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

71.1

0.48

0.9

64.8

36.5

Minor 5ss

34.4

-1.8

3.3

44.6

43.6

Minor BPS

47.9

-0

2.3

75.5

41.8

Associated Gene:

Gene:

PLOD1

Ensembl Gene ID:

ENSAPLG00000011324

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011890

5326264 - 5342283

16020