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Intron Name: Anas_platyrhynchos_platyrhynchos_22_5341868_5342127_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5341868 - 5342127

Intron Length:

260

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTCTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

AGGTGCTGATGT

Flanking Amino Acid:

ALNRVGIDYEGGGCRFLRYN

Intron Amino Acid Position:

680

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.4

1.14

0.6

94.3

17.7

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

82.1

0.72

0.8

80.6

31.5

Minor 5ss

38.6

-1.3

3.4

57.8

46.8

Minor BPS

40.7

-0.6

2.2

55.76

46.1

Associated Gene:

Gene:

PLOD1

Ensembl Gene ID:

ENSAPLG00000011324

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011890

5326264 - 5342283

16020