Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_22_5349226_5349894_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5349226 - 5349894

Intron Length:

669

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

GCTGTTTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTAAC

U12 Branch Point Sequence:

CGTATAGTAACC

Flanking Amino Acid:

KQITEEVERQVSNAMAEEIR

Intron Amino Acid Position:

410

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

66.7

0.42

1.2

67.6

36.5

Major PPT

79.2

0.66

0.9

37.4

Minor 5ss

31.7

-2.1

3.1

39.7

45.9

Minor BPS

44.3

-0.4

2.2

56.47

41.8

Associated Gene:

Gene:

MFN2

Ensembl Gene ID:

ENSAPLG00000012438

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013027

5344960 - 5354080

9121