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Intron Name: Anas_platyrhynchos_platyrhynchos_22_5363991_5364453_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5363991 - 5364453

Intron Length:

463

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGATCA

5'SS Class:

major

3'SS Sequence:

TTCTGTGTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

GTTTCATTATTC

Flanking Amino Acid:

EQDLITSSHKCVYCYRLNQR

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.1

64.3

36.4

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

71.9

0.49

1.1

68.5

42.1

Minor 5ss

40.2

-1.1

49.7

46.1

Minor BPS

59.2

0.27

1.9

72.49

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023889

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035039

5362567 - 5366506

3940