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Intron Name: Anas_platyrhynchos_platyrhynchos_22_5395903_5396972_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5395903 - 5396972

Intron Length:

1070

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

CTTCCTTCCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAC

U12 Branch Point Sequence:

TGTTACCTATGC

Flanking Amino Acid:

RVRDHTNNRIEKIYIMKADT

Intron Amino Acid Position:

348

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.5

Major BPS

71.4

0.53

1.2

63.4

Major PPT

0.72

0.7

80.4

24.9

Minor 5ss

40.3

-1.1

3.1

56.2

42.2

Minor BPS

44.1

-0.4

2.3

61.04

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013618

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014176

5387413 - 5397217

9805