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Intron Name: Anas_platyrhynchos_platyrhynchos_22_5400769_5408040_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5400769 - 5408040

Intron Length:

7272

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CAATTTTTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTCAT

U12 Branch Point Sequence:

TTTTCTCCAATT

Flanking Amino Acid:

ALLRGAVGGRNYSLPYTPQF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

0.9

71.1

34.7

Major BPS

69.4

0.48

1.2

71.6

36.4

Major PPT

77.1

0.61

0.9

69.7

Minor 5ss

27.1

-2.6

2.9

24.2

36.8

Minor BPS

61.5

0.44

1.9

84.92

35.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013632

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014200

5400643 - 5416071

15429