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Intron Name: Anas_platyrhynchos_platyrhynchos_22_5430119_5431060_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5430119 - 5431060

Intron Length:

942

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAGAC

5'SS Class:

strong_major

3'SS Sequence:

TGTTCAAACACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAA

U12 Branch Point Sequence:

GTGTCTTCGATG

Flanking Amino Acid:

VHDKFHDLAESVKEPLPDSP

Intron Amino Acid Position:

402

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.8

74.6

28.6

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

66.1

0.36

59.4

39.9

Minor 5ss

25.3

-2.8

3.2

31.7

42.9

Minor BPS

49.8

-0.1

1.6

54.86

41.1

Associated Gene:

Gene:

VPS13D

Ensembl Gene ID:

ENSAPLG00000013749

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014431

5422858 - 5521456

98599

ENSAPLT00000029463

5422858 - 5521456

98599

ENSAPLT00000018950

5422858 - 5521456

98599