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Intron Name: Anas_platyrhynchos_platyrhynchos_22_5432347_5433083_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5432347 - 5433083

Intron Length:

737

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAGGTGAA

5'SS Class:

major

3'SS Sequence:

AAATTCTTATAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTCTTTTAAAT

Flanking Amino Acid:

IFPVLVFPNPQKEVGCVSSF

Intron Amino Acid Position:

576

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.2

0.36

1.2

61.9

38.8

Major BPS

90.4

0.7

90.2

19.3

Major PPT

58.3

0.19

1.2

62.4

42.4

Minor 5ss

33.5

-1.9

3.5

48.8

47.3

Minor BPS

0.77

1.3

86.29

32.9

Associated Gene:

Gene:

VPS13D

Ensembl Gene ID:

ENSAPLG00000013749

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029463

5422858 - 5521456

98599

ENSAPLT00000018950

5422858 - 5521456

98599

ENSAPLT00000014431

5422858 - 5521456

98599