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Intron Name: Anas_platyrhynchos_platyrhynchos_22_5433157_5433732_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5433157 - 5433732

Intron Length:

576

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAAGACT

5'SS Class:

major

3'SS Sequence:

GCTTTTTATTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTGTAACT

Flanking Amino Acid:

LSSEMTNQNIVADPDAPVFE

Intron Amino Acid Position:

597

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

71.2

38.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

78.3

0.64

0.9

77.6

35.8

Minor 5ss

34.4

-1.8

3.3

46.4

43.2

Minor BPS

69.1

0.68

90.89

33.1

Associated Gene:

Gene:

VPS13D

Ensembl Gene ID:

ENSAPLG00000013749

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018950

5422858 - 5521456

98599

ENSAPLT00000029463

5422858 - 5521456

98599