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Intron Name: Anas_platyrhynchos_platyrhynchos_22_5433904_5434700_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5433904 - 5434700

Intron Length:

797

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAACCTT

5'SS Class:

major

3'SS Sequence:

ATCTCTTGTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TGTTTTATATCT

Flanking Amino Acid:

FFYKGRVHTSGFGYQSELEA

Intron Amino Acid Position:

655

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.7

0.44

1.2

67.2

43.8

Major BPS

79.2

0.73

75.3

39.4

Major PPT

77.4

0.62

0.9

72.2

37.3

Minor 5ss

39.5

-1.2

3.2

57.1

47.1

Minor BPS

53.9

0.2

1.9

77.05

39.5

Associated Gene:

Gene:

VPS13D

Ensembl Gene ID:

ENSAPLG00000013749

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029463

5422858 - 5521456

98599

ENSAPLT00000018950

5422858 - 5521456

98599

ENSAPLT00000014431

5422858 - 5521456

98599