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Intron Name: Anas_platyrhynchos_platyrhynchos_22_5436054_5436927_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5436054 - 5436927

Intron Length:

874

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGCCT

5'SS Class:

strong_major

3'SS Sequence:

TATTAATCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

ATTTTTTTAAAT

Flanking Amino Acid:

LGRILLTNSQEESKRNADTF

Intron Amino Acid Position:

742

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

68.7

41.8

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

73.3

0.52

0.9

66.2

39.3

Minor 5ss

39.5

-1.2

3.3

47.3

Minor BPS

75.1

0.86

1.2

87.12

31.6

Associated Gene:

Gene:

VPS13D

Ensembl Gene ID:

ENSAPLG00000013749

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029463

5422858 - 5521456

98599

ENSAPLT00000018950

5422858 - 5521456

98599