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Intron Name: Anas_platyrhynchos_platyrhynchos_22_5450800_5451358_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5450800 - 5451358

Intron Length:

559

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTTATTTCACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

AGATCTTTAATT

Flanking Amino Acid:

KGKDGCSSLARFDFKKSKLL

Intron Amino Acid Position:

2310

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.8

86.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

76.4

0.6

0.9

71.5

39.3

Minor 5ss

45.5

-0.5

2.9

66.2

44.9

Minor BPS

74.4

0.85

1.1

80.06

35.7

Associated Gene:

Gene:

VPS13D

Ensembl Gene ID:

ENSAPLG00000013749

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029463

5422858 - 5521456

98599

ENSAPLT00000018950

5422858 - 5521456

98599

ENSAPLT00000014431

5422858 - 5521456

98599