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Intron Name: Anas_platyrhynchos_platyrhynchos_22_5458144_5459050_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5458144 - 5459050

Intron Length:

907

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATAAAAT

5'SS Class:

major

3'SS Sequence:

TGTTTGGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCAAAC

U12 Branch Point Sequence:

AAACATGTAACG

Flanking Amino Acid:

SGDYYNRELSGWEPFIEPWP

Intron Amino Acid Position:

2729

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

75.8

33.1

Major BPS

67.4

0.43

73.2

28.9

Major PPT

80.2

0.68

76.9

42.1

Minor 5ss

40.6

-1.1

57.1

47.2

Minor BPS

-0.6

2.1

46.53

39.6

Associated Gene:

Gene:

VPS13D

Ensembl Gene ID:

ENSAPLG00000013749

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029463

5422858 - 5521456

98599

ENSAPLT00000018950

5422858 - 5521456

98599

ENSAPLT00000014431

5422858 - 5521456

98599