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Intron Name: Anas_platyrhynchos_platyrhynchos_22_5469892_5470510_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5469892 - 5470510

Intron Length:

619

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTCTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTATAAC

U12 Branch Point Sequence:

GTTTTCTTAAAG

Flanking Amino Acid:

SAPYWLINKTGLPLIFRQDN

Intron Amino Acid Position:

3232

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.2

1.14

0.6

93.2

14.5

Major BPS

60.2

0.25

1.3

39.8

Major PPT

78.1

0.63

78.9

33.6

Minor 5ss

43.8

-0.7

2.8

58.1

46.5

Minor BPS

0.55

1.4

73.29

38.8

Associated Gene:

Gene:

VPS13D

Ensembl Gene ID:

ENSAPLG00000013749

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029463

5422858 - 5521456

98599

ENSAPLT00000018950

5422858 - 5521456

98599

ENSAPLT00000014431

5422858 - 5521456

98599