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Intron Name: Anas_platyrhynchos_platyrhynchos_22_5474706_5474931_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5474706 - 5474931

Intron Length:

226

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCAAGA

5'SS Class:

major

3'SS Sequence:

TTTTATGCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATGC

Flanking Amino Acid:

KTQRVILKKKEPGKRSQLWR

Intron Amino Acid Position:

3581

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.1

0.43

1.2

62.8

43.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

74.7

0.56

70.3

39.9

Minor 5ss

37.3

-1.4

3.1

49.9

Minor BPS

58.1

0.23

1.9

73.08

38.7

Associated Gene:

Gene:

VPS13D

Ensembl Gene ID:

ENSAPLG00000013749

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029463

5422858 - 5521456

98599

ENSAPLT00000018950

5422858 - 5521456

98599

ENSAPLT00000014431

5422858 - 5521456

98599