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Intron Name: Anas_platyrhynchos_platyrhynchos_22_5475093_5475453_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5475093 - 5475453

Intron Length:

361

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGGAA

5'SS Class:

major

3'SS Sequence:

GCTTTTGTCGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATCAA

U12 Branch Point Sequence:

GAATCATCAAGT

Flanking Amino Acid:

IAGLAAVTDNRYEPLMLRKP

Intron Amino Acid Position:

3634

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

63.8

35.9

Major BPS

66.5

0.41

1.1

68.2

37.5

Major PPT

73.3

0.52

0.9

68.8

37.1

Minor 5ss

34.7

-1.7

3.5

46.2

Minor BPS

47.2

-0.1

2.1

65.01

44.4

Associated Gene:

Gene:

VPS13D

Ensembl Gene ID:

ENSAPLG00000013749

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029463

5422858 - 5521456

98599

ENSAPLT00000018950

5422858 - 5521456

98599

ENSAPLT00000014431

5422858 - 5521456

98599