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Intron Name: Anas_platyrhynchos_platyrhynchos_22_5580035_5584501_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5580035 - 5584501

Intron Length:

4467

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

CTGTTATGCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

CATTCCTGTACT

Flanking Amino Acid:

HYFYTLVEILAKTSESLGIF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.8

81.9

26.2

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

65.1

0.34

58.3

42.2

Minor 5ss

38.5

-1.3

2.9

45.9

43.7

Minor BPS

61.3

0.44

1.9

78.11

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014534

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015134

5579864 - 5594530

14667