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Intron Name: Anas_platyrhynchos_platyrhynchos_22_5584719_5586046_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5584719 - 5586046

Intron Length:

1328

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

ATTTGTTCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

ATTTCATTAACA

Flanking Amino Acid:

HGGCGMYGGIRSHERVCRYI

Intron Amino Acid Position:

130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

77.9

29.9

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

79.5

0.66

0.8

74.4

35.8

Minor 5ss

35.5

-1.6

44.2

37.3

Minor BPS

79.6

0.93

1.5

87.53

29.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014534

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015134

5579864 - 5594530

14667