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Intron Name: Anas_platyrhynchos_platyrhynchos_22_5586111_5587694_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5586111 - 5587694

Intron Length:

1584

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TTGTATATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATATAT

U12 Branch Point Sequence:

ATTTGTAGAAAT

Flanking Amino Acid:

RESDSVVMSVGYRLSPECKY

Intron Amino Acid Position:

151

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

72.3

39.5

Major BPS

71.4

0.53

67.3

39.3

Major PPT

81.1

0.7

0.9

78.3

39.6

Minor 5ss

31.6

-2.1

3.1

31.9

42.5

Minor BPS

45.2

-0.2

2.1

69.65

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014534

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015134

5579864 - 5594530

14667