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Intron Name: Anas_platyrhynchos_platyrhynchos_22_5600962_5602013_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5600962 - 5602013

Intron Length:

1052

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

CATTCCTATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

ACTATGTTAAAA

Flanking Amino Acid:

RKTNSVVVSVGYRLAPEYPY

Intron Amino Acid Position:

146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

72.4

39.5

Major BPS

87.6

0.93

0.9

89.3

Major PPT

72.6

0.51

0.9

70.6

34.8

Minor 5ss

31.6

-2.1

3.1

31.8

42.6

Minor BPS

47.3

-0.2

2.1

59.15

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014552

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015155

5595561 - 5602791

7231