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Intron Name: Anas_platyrhynchos_platyrhynchos_22_5611316_5612661_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5611316 - 5612661

Intron Length:

1346

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTCAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

ATTTGCTGAATT

Flanking Amino Acid:

HSVMITTMISGKILEKLGVC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

32.6

Major BPS

87.6

0.93

0.9

89.3

Major PPT

83.7

0.76

0.8

29.6

Minor 5ss

-1

2.7

51.5

44.9

Minor BPS

63.8

0.51

1.9

83.33

37.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014561

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015166

5611133 - 5616213

5081