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Intron Name: Anas_platyrhynchos_platyrhynchos_22_5620033_5622214_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5620033 - 5622214

Intron Length:

2182

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TGCCTTTGAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAG

U12 Branch Point Sequence:

TTGCCTTTGAAC

Flanking Amino Acid:

HIILICIAVVGKILEKIGIC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

26.1

Major BPS

67.4

0.43

1.5

65.3

43.7

Major PPT

68.4

0.41

64.8

40.2

Minor 5ss

39.7

-1.2

2.8

45.9

43.7

Minor BPS

60.1

0.3

1.4

68.13

37.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014563

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040192

5619856 - 5625440

5585

ENSAPLT00000015185

5619856 - 5628054

8199