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Intron Name: Anas_platyrhynchos_platyrhynchos_22_5622432_5622839_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5622432 - 5622839

Intron Length:

408

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGATAA

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

AATACCAAAACA

Flanking Amino Acid:

HGGGWTLGSVDTHENLCRLL

Intron Amino Acid Position:

132

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

75.7

29.2

Major BPS

71.2

0.53

70.3

31.9

Major PPT

86.6

0.82

0.8

84.6

30.3

Minor 5ss

37.4

-1.4

44.1

44.7

Minor BPS

49.6

-0

65.22

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014563

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040192

5619856 - 5625440

5585

ENSAPLT00000015185

5619856 - 5628054

8199