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Intron Name: Anas_platyrhynchos_platyrhynchos_22_5625317_5628746_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5625317 - 5628746

Intron Length:

3430

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAGTCTAC

5'SS Class:

weak_major

3'SS Sequence:

GCATCTATTAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATGAT

U12 Branch Point Sequence:

CATCTATTAAAG

Flanking Amino Acid:

PRMPYGRDWWKIEP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.7

0.18

1.2

55.1

Major BPS

75.8

0.64

65.8

Major PPT

61.3

0.26

1.1

39.4

Minor 5ss

45.2

-0.5

3.2

62.4

42.9

Minor BPS

47.9

-0.2

1.8

52.41

41.6

Associated Gene:

Gene:

C1orf158

Ensembl Gene ID:

ENSAPLG00000014733

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043254

5625304 - 5632149

6846

ENSAPLT00000015350

5625304 - 5632149

6846