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Intron Name: Anas_platyrhynchos_platyrhynchos_22_5628827_5630104_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5628827 - 5630104

Intron Length:

1278

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

TATATCTCTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTATAT

U12 Branch Point Sequence:

TGTTGTATATCT

Flanking Amino Acid:

IGNWLEERKRFIKPTGKLGH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

68.7

36.4

Major BPS

64.1

0.35

1.2

45.5

Major PPT

75.4

0.57

0.9

67.1

Minor 5ss

30.3

-2.3

3.2

31.5

42.2

Minor BPS

47.4

-0.1

2.2

73.4

43.5

Associated Gene:

Gene:

C1orf158

Ensembl Gene ID:

ENSAPLG00000014733

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015350

5625304 - 5632149

6846