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Intron Name: Anas_platyrhynchos_platyrhynchos_22_5726725_5733227_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

5726725 - 5733227

Intron Length:

6503

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCTGTATA

5'SS Class:

major

3'SS Sequence:

TTTTGACTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TGCTTTTTGACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.3

79.7

35.3

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

80.2

0.68

0.8

74.7

35.1

Minor 5ss

40.8

-1

2.6

51.4

45.1

Minor BPS

69.2

0.69

1.2

78.83

37.8

Associated Gene:

Gene:

PRDM2

Ensembl Gene ID:

ENSAPLG00000029288

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044130

5726682 - 5771933

45252