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Intron Name: Anas_platyrhynchos_platyrhynchos_22_580626_581219_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

580626 - 581219

Intron Length:

594

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGTTTT

5'SS Class:

major

3'SS Sequence:

TATTTTTTCCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

TTTTACTGATGT

Flanking Amino Acid:

VYRFFTRLGQIYQSWLDKST

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.64

1.2

79.9

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

83.2

0.75

0.7

77.4

36.6

Minor 5ss

41.1

-1

3.1

58.6

Minor BPS

49.4

0.03

2.2

78.01

43.9

Associated Gene:

Gene:

RER1

Ensembl Gene ID:

ENSAPLG00000025171

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041368

579300 - 587682

8383

ENSAPLT00000009968

579575 - 584459

4885