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Intron Name: Anas_platyrhynchos_platyrhynchos_22_583122_583227_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

583122 - 583227

Intron Length:

106

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TGTTATTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TAATTATTAATG

Flanking Amino Acid:

FIRRLPEFKFWHSATKGILV

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

70.2

35.8

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

75.7

0.58

1.1

79.5

37.9

Minor 5ss

26.7

-2.7

28.5

38.4

Minor BPS

59.1

0.15

1.6

62.43

39.3

Associated Gene:

Gene:

RER1

Ensembl Gene ID:

ENSAPLG00000025171

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009968

579575 - 584459

4885

ENSAPLT00000041368

579300 - 587682

8383