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Intron Name: Anas_platyrhynchos_platyrhynchos_22_583364_584210_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

583364 - 584210

Intron Length:

847

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACCTGC

5'SS Class:

major

3'SS Sequence:

TTTTTCTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

TTTTTCTTTACA

Flanking Amino Acid:

FCITMKRQIKHMIKYRYIPF

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.2

64.1

43.4

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

96.1

1.04

0.5

91.7

19.5

Minor 5ss

49.7

-0

2.6

68.4

42.6

Minor BPS

77.1

0.85

1.5

87.01

30.8

Associated Gene:

Gene:

RER1

Ensembl Gene ID:

ENSAPLG00000025171

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041368

579300 - 587682

8383

ENSAPLT00000009968

579575 - 584459

4885