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Intron Name: Anas_platyrhynchos_platyrhynchos_22_591032_591847_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
591032 - 591847

Intron Length:
816

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAC|GTAAGTGGA

5'SS Class:
major

3'SS Sequence:
GTGCATTATGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AACTAAA

U12 Branch Point Sequence:
AGTAACTAAACA

Flanking Amino Acid:
LSKRIAGIRYLRFGGVQAED

Intron Amino Acid Position:
201

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78
0.66
1.3
72.4
39.5

Major BPS
68.7
0.47
0.9
67.9
25

Major PPT
68.6
0.42
1
62.2
43.2

Minor 5ss
33.4
-1.9
3.2
39.3
39.8

Minor BPS
51.1
0.03
1.9
64.76
40.9

Associated Gene:

Gene:
PEX10

Ensembl Gene ID:

Chromosome:
22

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

587568 - 593096
5529