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Intron Name: Anas_platyrhynchos_platyrhynchos_22_5988762_5990007_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5988762 - 5990007

Intron Length:

1246

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCCTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTGAT

U12 Branch Point Sequence:

TGCAGCTGATGC

Flanking Amino Acid:

ASAEPSQQEDSQEEDEDTSS

Intron Amino Acid Position:

114

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

0.8

83.9

30.3

Major BPS

67.4

0.43

1.1

57.1

41.8

Major PPT

0.83

0.6

85.1

22.4

Minor 5ss

44.3

-0.6

3.1

64.1

47.4

Minor BPS

37.6

-0.9

2.1

44.4

43.3

Associated Gene:

Gene:

TMEM51

Ensembl Gene ID:

ENSAPLG00000023758

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025373

5983796 - 5990431

6636