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Intron Name: Anas_platyrhynchos_platyrhynchos_22_6001437_6002799_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6001437 - 6002799

Intron Length:

1363

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGCACC

5'SS Class:

major

3'SS Sequence:

CTGTTCTTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

AGCCTGATAACT

Flanking Amino Acid:

DNQLAVVSAKCSRLKEEMKR

Intron Amino Acid Position:

308

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

1.2

70.9

39.4

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

80.5

0.69

0.8

73.4

37.1

Minor 5ss

-1.5

2.6

42.6

Minor BPS

-0.3

2.2

61.16

42.3

Associated Gene:

Gene:

FHAD1

Ensembl Gene ID:

ENSAPLG00000009303

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036630

5994126 - 6015432

21307

ENSAPLT00000009694

5994126 - 6015432

21307

ENSAPLT00000046530

5994126 - 6015432

21307