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Intron Name: Anas_platyrhynchos_platyrhynchos_22_6002866_6003240_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6002866 - 6003240

Intron Length:

375

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

GGGACTCTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAAACAA

U12 Branch Point Sequence:

CTTTCTGGGACT

Flanking Amino Acid:

GERDVTPYQKRIGELECDLK

Intron Amino Acid Position:

330

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

81.1

26.3

Major BPS

48.1

-0.1

0.9

53.4

30.8

Major PPT

66.6

0.37

58.2

Minor 5ss

-1

2.9

52.8

38.5

Minor BPS

49.3

0.03

2.2

75.29

Associated Gene:

Gene:

FHAD1

Ensembl Gene ID:

ENSAPLG00000009303

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009694

5994126 - 6015432

21307

ENSAPLT00000046530

5994126 - 6015432

21307

ENSAPLT00000036630

5994126 - 6015432

21307