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Intron Name: Anas_platyrhynchos_platyrhynchos_22_6003346_6003850_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6003346 - 6003850

Intron Length:

505

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

ACTTTGATAATC

Flanking Amino Acid:

IQSKLSEKAKAEEELKNACE

Intron Amino Acid Position:

365

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

84.2

33.9

Major BPS

0.85

0.9

39.9

Major PPT

86.6

0.82

0.9

84.6

Minor 5ss

39.5

-1.2

3.2

58.6

45.9

Minor BPS

46.8

-0.2

2.2

60.7

39.2

Associated Gene:

Gene:

FHAD1

Ensembl Gene ID:

ENSAPLG00000009303

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036630

5994126 - 6015432

21307

ENSAPLT00000009694

5994126 - 6015432

21307

ENSAPLT00000046530

5994126 - 6015432

21307