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Intron Name: Anas_platyrhynchos_platyrhynchos_22_6005858_6006202_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6005858 - 6006202

Intron Length:

345

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTCAT

5'SS Class:

strong_major

3'SS Sequence:

TTATTGCTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

TTGGTCTTATTG

Flanking Amino Acid:

VFKESVRELQAFLGTSFCSD

Intron Amino Acid Position:

480

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

1.2

77.9

38.6

Major BPS

79.7

0.74

79.6

35.6

Major PPT

79.9

0.67

0.8

36.2

Minor 5ss

31.3

-2.1

2.9

41.4

Minor BPS

51.5

-0

1.8

58.01

44.6

Associated Gene:

Gene:

FHAD1

Ensembl Gene ID:

ENSAPLG00000009303

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046530

5994126 - 6015432

21307

ENSAPLT00000036630

5994126 - 6015432

21307

ENSAPLT00000022238

5994126 - 6015432

21307

ENSAPLT00000009694

5994126 - 6015432

21307