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Intron Name: Anas_platyrhynchos_platyrhynchos_22_6011676_6012035_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6011676 - 6012035

Intron Length:

360

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTGTCGTGCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACCCAT

U12 Branch Point Sequence:

GTAGCCTGAAAC

Flanking Amino Acid:

ETQARMSDMRGELSEKQKAE

Intron Amino Acid Position:

819

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

1.1

78.8

30.1

Major BPS

55.7

0.14

1.2

64.4

33.7

Major PPT

66.6

0.37

65.6

Minor 5ss

28.4

-2.5

2.9

32.1

42.4

Minor BPS

53.4

0.09

1.7

62.75

41.8

Associated Gene:

Gene:

FHAD1

Ensembl Gene ID:

ENSAPLG00000009303

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036630

5994126 - 6015432

21307

ENSAPLT00000022238

5994126 - 6015432

21307

ENSAPLT00000009694

5994126 - 6015432

21307

ENSAPLT00000046530

5994126 - 6015432

21307