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Intron Name: Anas_platyrhynchos_platyrhynchos_22_6025588_6025687_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6025588 - 6025687

Intron Length:

100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAGTGTG

5'SS Class:

major

3'SS Sequence:

TGTGCCCGGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGGTAAC

U12 Branch Point Sequence:

CTGGTGGTAACG

Flanking Amino Acid:

GGDGVVSGCNGDSGGPLNCQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

74.3

36.2

Major BPS

59.3

0.23

1.3

61.4

43.2

Major PPT

59.3

0.21

1.1

54.5

41.4

Minor 5ss

33.3

-1.9

3.4

44.7

43.5

Minor BPS

39.2

-0.9

2.5

45.44

47.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019333

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023753

6025546 - 6027252

1707