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Intron Name: Anas_platyrhynchos_platyrhynchos_22_6029232_6029674_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6029232 - 6029674

Intron Length:

443

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGATAA

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCTCTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAGTAAT

U12 Branch Point Sequence:

CTCTCTCTGAAG

Flanking Amino Acid:

DILVSYSTFPGFVSWRDKSS

Intron Amino Acid Position:

380

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.8

79.1

24.3

Major BPS

58.9

0.22

1.4

61.7

43.1

Major PPT

70.6

0.46

71.1

27.3

Minor 5ss

31.8

-2.1

37.8

Minor BPS

46.5

-0.4

1.8

51.85

Associated Gene:

Gene:

CASP9

Ensembl Gene ID:

ENSAPLG00000008851

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009216

6028522 - 6035507

6986