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Intron Name: Anas_platyrhynchos_platyrhynchos_22_6031233_6031800_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6031233 - 6031800

Intron Length:

568

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGTG

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTGTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGAAA

U12 Branch Point Sequence:

AAACCCTTACTG

Flanking Amino Acid:

VQTLRNLKAQEINAKLRSLA

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

38.2

Major BPS

65.4

0.38

1.4

75.9

36.3

Major PPT

81.6

0.71

0.9

77.2

37.1

Minor 5ss

27.4

-2.6

3.5

36.8

47.7

Minor BPS

51.3

-0.1

1.7

53.62

41.1

Associated Gene:

Gene:

CASP9

Ensembl Gene ID:

ENSAPLG00000008851

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009216

6028522 - 6035507

6986