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Intron Name: Anas_platyrhynchos_platyrhynchos_22_6036426_6036857_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6036426 - 6036857

Intron Length:

432

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGCGC

5'SS Class:

strong_major

3'SS Sequence:

ATCTGCTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAT

U12 Branch Point Sequence:

TCTTCTGTCATC

Flanking Amino Acid:

KFIQISKAYEILSNEEKRAN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

67.8

43.5

Major BPS

72.5

0.56

1.2

39.9

Major PPT

71.5

0.48

0.9

62.1

39.3

Minor 5ss

31.1

-2.2

3.3

41.9

44.9

Minor BPS

47.7

-0.2

2.3

65.01

41.9

Associated Gene:

Gene:

DNAJC16

Ensembl Gene ID:

ENSAPLG00000008368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036316

6035583 - 6044187

8605

ENSAPLT00000031519

6035583 - 6044187

8605

ENSAPLT00000008723

6035583 - 6043675

8093