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Intron Name: Anas_platyrhynchos_platyrhynchos_22_6038302_6038900_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6038302 - 6038900

Intron Length:

599

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGTC

5'SS Class:

strong_major

3'SS Sequence:

ACTCTGTTTAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

GTTACACTAACG

Flanking Amino Acid:

NLLPGNLVEKITDKNYIRFL

Intron Amino Acid Position:

252

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

81.2

32.7

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

67.5

0.39

1.1

66.6

Minor 5ss

35.9

-1.6

3.5

51.5

45.7

Minor BPS

49.8

-0.1

2.1

63.64

43.2

Associated Gene:

Gene:

DNAJC16

Ensembl Gene ID:

ENSAPLG00000008368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036316

6035583 - 6044187

8605

ENSAPLT00000031519

6035583 - 6044187

8605

ENSAPLT00000008723

6035583 - 6043675

8093