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Intron Name: Anas_platyrhynchos_platyrhynchos_22_6040683_6040867_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6040683 - 6040867

Intron Length:

185

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCC|GTGAGCGTT

5'SS Class:

major

3'SS Sequence:

TTGCTTTGTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTCAT

U12 Branch Point Sequence:

TCCTGTCTGACA

Flanking Amino Acid:

DDEKYRGKSAVVILERRNSA

Intron Amino Acid Position:

445

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.3

0.27

1.3

63.5

42.9

Major BPS

0.65

1.1

77.4

37.3

Major PPT

79.5

0.66

72.8

42.2

Minor 5ss

38.7

-1.3

3.6

Minor BPS

46.1

-0.3

2.1

58.27

Associated Gene:

Gene:

DNAJC16

Ensembl Gene ID:

ENSAPLG00000008368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036316

6035583 - 6044187

8605

ENSAPLT00000031519

6035583 - 6044187

8605

ENSAPLT00000008723

6035583 - 6043675

8093