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Intron Name: Anas_platyrhynchos_platyrhynchos_22_6042881_6043278_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6042881 - 6043278

Intron Length:

398

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGTTGG

5'SS Class:

major

3'SS Sequence:

TCTCTCCTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

CCATGTTCATCC

Flanking Amino Acid:

KFALEVYTFTGSSSLHFSFL

Intron Amino Acid Position:

648

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

1.1

60.6

46.7

Major BPS

84.8

0.86

85.7

34.9

Major PPT

80.9

0.7

72.9

31.9

Minor 5ss

37.8

-1.4

3.1

40.1

Minor BPS

41.2

-0.6

46.51

Associated Gene:

Gene:

DNAJC16

Ensembl Gene ID:

ENSAPLG00000008368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036316

6035583 - 6044187

8605

ENSAPLT00000031519

6035583 - 6044187

8605