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Intron Name: Anas_platyrhynchos_platyrhynchos_22_6048262_6048505_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6048262 - 6048505

Intron Length:

244

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGGT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTCAG

U12 Branch Point Sequence:

CGTTCCTTCAGC

Flanking Amino Acid:

PEIAGLTPSQALEIIRGCKG

Intron Amino Acid Position:

284

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.8

35.2

Major BPS

51.1

0.03

1.6

43.2

Major PPT

84.5

0.78

0.8

37.2

Minor 5ss

26.7

-2.7

3.3

38.5

46.6

Minor BPS

54.8

0.13

2.1

66.71

45.1

Associated Gene:

Gene:

AGMAT

Ensembl Gene ID:

ENSAPLG00000008104

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008412

6047322 - 6050581

3260