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Intron Name: Anas_platyrhynchos_platyrhynchos_22_6049073_6049171_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6049073 - 6049171

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

CTGTCTCGCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

TGGGTGCTAATG

Flanking Amino Acid:

TYPILQAVAEKHGPVGLVHV

Intron Amino Acid Position:

158

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

81.1

26.3

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

64.9

0.34

0.9

38.5

Minor 5ss

-1

2.9

52.8

38.5

Minor BPS

39.7

-0.9

2.3

43.61

42.7

Associated Gene:

Gene:

AGMAT

Ensembl Gene ID:

ENSAPLG00000008104

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008412

6047322 - 6050581

3260