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Intron Name: Anas_platyrhynchos_platyrhynchos_22_6049965_6050060_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6049965 - 6050060

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGACG

5'SS Class:

strong_major

3'SS Sequence:

TTTGCCCACCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAT

U12 Branch Point Sequence:

TGCTCCTGATTC

Flanking Amino Acid:

DTGTSNRPGARFGPRQIRAE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

76.1

39.5

Major BPS

78.8

0.71

67.6

40.6

Major PPT

71.3

0.48

0.9

62.9

38.7

Minor 5ss

32.6

-2

3.1

40.4

45.5

Minor BPS

53.8

0.1

1.7

63.92

41.8

Associated Gene:

Gene:

AGMAT

Ensembl Gene ID:

ENSAPLG00000008104

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008412

6047322 - 6050581

3260