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Intron Name: Anas_platyrhynchos_platyrhynchos_22_6063887_6064293_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6063887 - 6064293

Intron Length:

407

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGGCGC

5'SS Class:

major

3'SS Sequence:

TGCTTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGGTGAG

U12 Branch Point Sequence:

TAGGGGTGAGCG

Flanking Amino Acid:

LLTAGGEIFSGCNVENACYS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.1

58.8

42.8

Major BPS

39.9

-0.6

1.7

28.5

45.1

Major PPT

75.4

0.57

0.8

69.7

31.1

Minor 5ss

30.7

-2.2

3.2

33.6

41.9

Minor BPS

33.4

-1.4

2.4

36.9

Associated Gene:

Gene:

CDA

Ensembl Gene ID:

ENSAPLG00000018400

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026858

6063186 - 6065758

2573